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Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater … to analyze 500 metagenomes, it was the biggest project the JGI had ever put together. The next 3 episodes are the …
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… series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running smaller assemblies — so we head there for a sense of what this supercomputing looks like. …
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Workshop The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and related fields who are interested in learning … and seminars as well as practical hands-on sessions in bioinformatics and biostatistics. …
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… here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and related fields who are interested in learning … and seminars as well as practical hands-on sessions in bioinformatics and biostatistics Several sessions will be devoted …
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When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High … biology, Robert Evans and Jan-Fang Cheng in the Functional Genomics group took it upon themselves to mentor them. …
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… sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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… genomes in general, Jef Boeke, Weimin Zhang (NYU Langone Health) and Leslie Mitchell (Neochromosome) have worked … to replace yeast’s native chromosomes with synthetic versions. This project has turned out to be an international collaboration, with some artistic endeavors along the …
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Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, …
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TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to …
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… (UC Berkeley and the Joint BioEnergy Institute) are looking for new ways to engineer plants. So they’ve looked into … how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these …
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