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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … seven. Doudna was recognized for her work on CRISPR-Cas9, technology described by the Nobel Foundation as having “a … Combining forces with UC Berkeley to seek elusive gene-editing …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … history and perennial lifecycle makes it important to study directly. The large and complex genome of M. sinensis … of California, Berkeley and the HudsonAlpha Center for Biotechnology. Most plants are diploids with two copies of each …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new genetic mapping … species that have been separated for millions of years. The study highlights the genes that could be used to make other …
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Adaptations to marine versus terrestrial low temperature environments as revealed by comparative genomic analyses of the genus Psychrobacter
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From bench to biotech: how a CURE cultivates student self-efficacy, gains in scientific thinking, and career aspirations
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal … were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of … is typically observed, but to the “TACK” superphylum,” said study first author Bojk Berghuis. “This provided us with …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at … and metabolism, work on which she will expand with her study of microbes in California’s manmade water transport … lab at the University of Texas-Austin. Rambo will be studying the influence of viruses on carbon cycling in …
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Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations
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Low Mutation Rate and Atypical Mutation Spectrum in Prasinoderma coloniale: Insights From an Early Diverging Green Lineage
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions … Q: Can you give us an idea about the scale of an average study? How many samples are typically involved? How long … and data analyses capabilities available on a peer-reviewed competitive basis via its  User Programs . Q:  Are …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced … (Berkeley Lab). All of the fungal genomes used in the study are available on the JGI fungal portal  MycoCosm . The … The project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of Energy … outline the questions they asked – and answered – in the study that recently appeared in the Proceedings of the …
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