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Northern peatland microbial communities exhibit resistance to warming and acquire electron acceptors from soil organic matter
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Comparison of short-read and long-read metagenome assemblies in a natural soil community highlights systematic bias in recovery of high-diversity populations
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Amplicon sequencing of ice and water phytoplankton and bacterial communities during an extreme winter in a central Canadian great lake
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JGI Hosts GPU Hackathon in May
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life … the JGI hackathon is particularly focused on developing bioinformatics applications instead of on simulation codes. … genomics data and has a strong reputation in the community,” said JGI Chief Informatics Officer Kjiersten …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… our collaborations and capabilities to enable great science that will help solve energy and environmental … portal Phytozome. The combination of field data and genetic information has allowed the research team to associate … Just as the common gardens have flourished, so has the community of switchgrass researchers grown. After almost two …
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Taking Stock of the Known and Unknown Microbial Space
… microbial genomes becoming available to the global research community.  Published January 17, 2025 in Science Advances , … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … playing key roles in regulating global nutrient cycles. The information gained from understanding the interactions …
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The fungus that made itself at home
… Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic information from similar organisms, researchers have gained … at the Joint Genome Institute, a DOE Office of Science User Facility, compared the genomes of two strains of fungi …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… made possible by CRISPR-Cas9; the Weizmann Institute of Science’s Assaf Vardi, who delved into algae blooms and the … and barley. During her keynote speech to JGI staff and users at our 2022 Annual Meeting, Wessler discussed the … is impacted by TE activity. Her lab has leveraged bioinformatics in computational analysis to identify and …
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DAP-seq Drives Robust Mapping of Gene Regulation
… DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … species; stricter filtering criteria provides a robust community dataset of improved quality; deep insights … Aligned with DOE Biological and Environmental Research program goals, this work helps advance a fundamental …
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Microbial Community Field Surveys Reveal Abundant Pseudomonas Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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Integration of Metagenomic and Stable Carbon Isotope Evidence Reveals the Extent and Mechanisms of Carbon Dioxide Fixation in High-Temperature Microbial Communities
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