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JGI Mural
The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of iconic … to advancing the frontiers of environmental and energy genomics. Click on the images below to learn about the …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Waiting to Respire
Facility, and research scientist Frederik Schulz in Woyke’s Single Cells group had generated and analyzed single amplified genomes of Margulisbacteria from marine … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Computationally Classifying Fungal Lifestyles
Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes includes … The data allowed the team to reclassify 25  Dothideomycetes species, and also provides more information about speciation …
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Exploring Polymorphisms Created by Transposable Elements
… elements (TEs) contributed to in the grass model species Brachypodium hybridum . …
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How to Target a Microbial Needle within a Community Haystack
… the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of microbes that … a target, HCR-FISH attaches multiple fluorescent tags to a single binding site, resulting in target cells that give off …
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JGI-UC Merced Interns Share Their 2021 Experiences
… the goal of inspiring students to embark on a career in genomics and to help foster a diverse future workforce in … Elements … Evolution of the Mitochondria Internship … Cross Species Integration of Single Cell Transcriptomes … Exploring and Visualizing P. …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… user facility. The staff and resources shifted to offering genomic science capabilities for energy and environmental …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar … to some extent, the water availability, temperature variations etc are all more extreme in the field. By having … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Finding the Fermenters
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… in large data sets, their work may be akin to finding a single snowflake on a colored-in page of that book. … Finding the RNA virus snowflakes in the snowstorm of genomic data involved developing special computational … to compare and reconcile the findings, coming up with a single, non-redundant dataset,” said Koonin. “Hopefully, …
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Krishna Palaniappan
Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …
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