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Gene Expression: From On-Off Switch to Dial
… pathways. Compared to the traditional way, which leverages an all-or-nothing approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of gene … approach to fine-tune gene expression. They tested this new methodology in yeast ( Saccharomyces cerevisiae) to …
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Jinghua Jenny Huang
Jenny is working on the display and visualization of large amount isolate genomic and metagenomic data stored in Oracle databases, Berkeley DB and files in …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, functional … and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data exchange and assists with large scale computations on …
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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … genes. This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently … metabolized in filamentous fungi. The work also suggests a new approach to gene annotation, which then can be explored …
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Neha Varghese
… key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for …
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Exploring and Thinking Critically about Scientific Problems with JGI Interns
… to achieve, they constantly collaborated with each other on new ways of presenting and researching science. …
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SIPs with Standards
SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to … more researchers. Ultimately, the goal is to generate SIP data that can be useful to multiple teams and analyses. This … more reusable, and more insightful, for the future of studying microbial communities.   …
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … from greening disease. You’ve probably never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  Citrus genus, which gives us lemons, kumquats, …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
Hear how their recent work revealed more about the history of the Chloroflexota phylum and a new way of moving: a tail-like flagella.  …
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Crawling through time: Transition of snails to slugs dating back to the Paleozoic, based on mitochondrial phylogenomics
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Exploring Phages at JGI
… college student, I never really entertained the possibility of working at a national laboratory. However, through the … with extraordinary scientists and gained exposure to new and different opportunities that could be available once …
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