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Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites … (1996) … List available on Google Scholar … Education … Publications …

Meta-omics datasets show that CRISPR-Cas systems determine … crust, there is a vast ecosystem connected to the global carbon cycle. Archaea are key players in this deep … it to usable organic compounds. However, no microbe works alone. Archaea, bacteria, and viruses all operate in concert …

Ancient  Chloroflexota s ditched their flagella and other … with special skills to break down pollutants and recycle carbon. They were part of an ancient lineage of bacteria to … bacteria have enzymes to synthesize or degrade plant hormones, meaning its land-dwelling counterparts could have the …

As SIP experiments shed more light on microbial communities … weeks of tricky, laborious lab work to analyze samples from one experiment. Starting a  few years ago, researchers can … The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific …

…   To understand virus-host dynamics, computation helps fill in what … organisms carry out important environmental processes like  carbon fixation , nitrogen cycling and methane production. … of using phages to engineer microbial communities. One day, these phages could boost plant-microbe …

Dr. Malmstrom is a Staff Scientist and leader of the Microscale … the first ever measurements of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …

Uri Neri is a computational biologist who spends his days wrangling viral genomes and …

Analysis reveals cotton genome stability across global … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton … The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific …

Scientists have discovered that the candidate bioenergy feedstock … researcher Joseph Napier from the Juenger lab and computational biologist Paul Grabowski of HudsonAlpha … genetic backgrounds, and that these 8X populations contain novel combinations of genetic diversity. We also found that …

WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical … applications instead of on simulation codes. “JGI is one of the largest producers of environmental genomics data … and Oak Ridge National Laboratory (ORNL) to make sure our computational workload can leverage future HPC systems – our …

Over 40 percent of the cereal crop’s genes respond to drought stress. The Science … For the study, the team grew two sorghum varieties: one that tolerates better pre-flowering drought stress and a … JGI researchers helped develop the overall experimental design, sequenced the RNA from nearly 400 root and leaf …

JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG … metagenomes. He also demonstrates briefly how to leverage novel capabilities of IMG/VR to browse and search through …