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High-resolution phylogenetic microbial community profiling
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A Comparison of Microbial Genome Web Portals
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The Integrated Microbial Genome Resource of Analysis
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Scaling Up Existing Skill Sets
… internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from … of the internship, 4th year PhD student in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative … Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer …
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Dispatches From JGI Interns
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Plotting a Model for Virus-Host Warfare Deep Below Ground
They are abundant representatives of deep subsurface ecosystems. A team of researchers described how the viruses … Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … that indicate repelled attempts to infect and lyse the microbial cells. This demonstration of the virus-host arms …
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Supercharging SIP in the Fungal Hyphosphere
… automated aspects of a commonly-used process for studying microbial communities, with results published in the  … most widespread type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial … things like biomass and  biofuels . However, AMF and the microbial communities they inhabit are notoriously difficult …
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JGI@25: The Little Alga That Could
… evolutionary history. Retaining ancestral features of both plant and animal cells, it shares nearly 7,000 genes with … (a third of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely … stumbled upon an interesting observation in Chlamy. Most plants require the nutrient copper for photosynthesis; …
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Measurement of bacterial replication rates in microbial communities
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Metagenomic analysis of a stable trichloroethene-degrading microbial community
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Impact of Harvest on Switchgrass Leaf Microbial Communities
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A single-cell genomics pipeline for environmental microbial eukaryotes
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