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… difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, land plant … duplication event that occured some 60 million years ago. Massive gene loss, rampant gene duplications, and even more … generate high-quality genome assemblies and annotations for 35 species representing all major evolutionary lineages in …

… Program awarded under UC-DOE Prime Contract DE-AC02-05CH11231. The work conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by …

… then employ CRISPR in a variety of microbial hosts. Summary Photorhabdus luminescens proves fatal to insects. It is … User Facility, is supported under contract DE-AC02- 05CH11231. …

… U.S. Department of Energy under Contract No. DE-AC02-05CH11231. This work was supported in part by NIH grants DP2 OD008677 and R01 GM124589, NIH training grant T32 GM066698, and UC Berkeley College of Chemistry Summer …

… with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it … Antarctic lakes and the nearby Southern Ocean shift from phototrophs to archaea when sunlight becomes scant, Ace … found that the green sulfur bacteria population spiked to 83%, only to dramatically fall to 1% in early spring and …

… Selected Publications …

… protein, researchers have new insights into how these ocean photosynthesizers cycle carbon in changing conditions. The products of photosynthesis are easy to point out. Plants, algae and … turn carbon dioxide and water into oxygen and sugars. How photosynthesis works, though, is much harder to pin down.  …

… it does chemosynthesis, which is a process analogous to photosynthesis for plants.” Another outstanding question is …

… multi-lab National Microbiome Data Collaborative (NMDC). Prospective users with questions on how to partner with the … Vyshenska D, et al. 2023. A standardized quantitative analysis strategy for stable … mSystems . 8(4):e0128022. Kelliher JM, et al. 2023. Cohort-based learning for microbiome research community …

… Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at … metabolism in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a universal tool … Anderson et. al., Exploiting algal NADPH oxidase for biophotovoltaic energy. Plant biotechnology journal . 14: 1, …

… common bean’s nutritional value, providing anywhere from 10-30% of daily protein requirements. It is also an essential … for large producers. The team sequenced and assembled a 473-million basepair genome of the common bean, identifying …

… areas of focus and data and computational needs. Over its 23-year history, JGI has produced more than 13 petabytes of data, accessible through the Genome Portal. …