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Marine Microbe Contains Multitudes
… help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms … understanding of carbon fluxes in the environment. Moreover, the deep ocean is the largest inorganic reservoir … their gene expression, the team then sequenced community genomes and expressed gene transcripts (metagenomes, …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … as cardiovascular disease, colorectal cancer. Lawrence Livermore National Laboratory had teams studying Chromosome 19, … was being waged. In the JGI@25 video below, Susan Lucas, former JGI Production Department Head and current ESnet …
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Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops
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Genome Sequences of Industrially Relevant Saccharomyces cerevisiae Strain M3707, Isolated from a Sample of Distillers Yeast and Four Haploid Derivatives
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Polar Phytoplankton Need Zinc to Cope with the Cold
… other oceans. That zinc turns out to be extremely important for polar phytoplankton.  After peering into the function … that time, they noted that the F. cylindrus genome encoded more proteins requiring zinc than non-polar algae. They … the green alga Microglena sp. YARC, which also contains expanded genes for proteins requiring zinc. Co-expression …
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MycoCosm Tutorial
… Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. Presented …
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Tanja Woyke
… was the symbiont community of a gutless oligochaete for which she deciphered function and host-symbiont … an Adjunct Scientist appointment at the Bigelow Laboratory for Ocean Sciences since 2012 and an Adjunct Professor at the University of California, Merced's School of Natural Sciences since 2015. …
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Scaling Up Existing Skill Sets
… paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from … thing I valued the most, such as AWS, Linux operation, and more. The JGI experiences are just so amazing and truly an …
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Refining the Process of Identifying Algae Biotechnology Candidates
… -- copy to summary above^ as well ] The Science The recipe for growing algae as a source of sustainable biofuels seems … Labs to screen, characterize, sequence and then analyze the genomes and multi-omics datasets for algae that can be used … team at the JGI led the multi-omics analysis effort for a more complete picture. The team annotated the algal genome …
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IMG/VR
… the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel … capabilities of IMG/VR to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …
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Seasonal Dynamics of Core Fungi in the Switchgrass Phyllosphere, and Co-Occurrence with Leaf Bacteria
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Methylotrophy in the Mire: direct and indirect routes for methane production in thawing permafrost
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