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Methane Cycling Microbial Community Characteristics: Comparing Natural, Actively Extracted, Restored and Unrestored Boreal Peatlands
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The Dynamic Influence of Subsurface Geological Processes on the Assembly and Diversification of Thermophilic Microbial Communities in Continental Hydrothermal Systems
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth Promoting Rhizobacterium Graduate Interns … extremophile protists from a hypersaline alkaline lake in California. Sandra Hernandez Gonzalez : Out of this …
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An Integrated Dataset to Understand Ecosystem Interaction
… the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand … data set will help identify how different elements of the ecosystem interact and respond to changes in the … and small molecules produced by the trees and associated microbial communities. This revealed key metabolic pathways …
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Three Join the JGI User Executive Committee
… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological Society of … biogeochemical cycles in soils and sediments and plant-microbial interactions in crops. He has been a PI or Co-PI …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … that indicate repelled attempts to infect and lyse the microbial cells. This demonstration of the virus-host arms …
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Assembling the Marine Metagenome, One Cell at a Time
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Hiroshi Otani
… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … identification of regulons of transcriptional machineries. Nat Commun. 2022 Jun 17;13(1):3502. Udwary DW, Otani … H, Mouncey NJ. New keys to unlock the treasure trove of microbial natural products. Nat Rev Microbiol. 2021 …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  … The work builds upon a pilot project to sequence antimicrobial-producing strains. Established by Handelsman, Tiny Earth aims to crowdsource antimicrobial discovery for the control of plant pathogens, …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a … because they often need unique conditions and a specific microbial host to replicate. Sequencing genetic material … 16. The same year, the JGI expanded its existing Integrated Microbial Genomes & Microbiomes database to include a …
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Mesophilic and Thermophilic Conditions Select for Unique but Highly Parallel Microbial Communities to Perform Carboxylate Platform Biomass Conversion
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Complete genome sequence of Enterobacter sp. IIT-BT 08: A potential microbial strain for high rate hydrogen production
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