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A Model System for Perennial Grasses
… including researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the … the candidate bioenergy crop, switchgrass. Through the JGI’s Community Science Program , JGI sequenced and assembled near-complete genomes of P. …
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Green Algae Reveal One mRNA Encodes Many Proteins
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (FICUS) collaborative science initiative between the JGI and EMSL.  … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Fungus Fuels Tree Growth
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  … Ecosystems (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, …
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Tracking the Origins of Methane-Producing Microbes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the … archaea. The Quake lab had previously collaborated with the JGI on a proposal using this approach through the Emerging … (ETOP). Following that work, they partnered once more with JGI Microbial Program head Tanja Woyke and her Single Cells …
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Building Wet and Dry Lab Skills
… on to Dori – a computer cluster owned and operated by the JGI and Berkeley Lab – to launch a jupyter notebook running … Alabama A&M majoring in Biology, and I'm also an intern at JGI with Yi and Sharon. Yi Zhai : Hi, everyone. My name is … how to run Dori, which is a compute cluster owned by JGI, and used Jupyter notebook for a programming environment …
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Understanding Wildfire Recovery, Starting in Soil
… and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI). EMSL and the JGI are DOE Office of Science User Facilities located at …
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Effects of Polar Light Cycle on Microbial Food Web
… Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Laboratory (Berkeley Lab). The work was enabled by the JGI’s Community Science Program. For most months each year, …
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Boosting Small Molecule Production in Super “Soup”
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … paper is the first result of the collaboration with the JGI, where they are partnering with Yasuo Yoshikuni and Ian … that we plan to offer to users in the near term,” added JGI Director Nigel Mouncey . Hal Alper will be speaking on …
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Boosting Small Molecule Production in Super “Soup”
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … paper is the first result of the collaboration with the JGI, where they are partnering with  Yasuo Yoshikuni and  … that we plan to offer to users in the near term,” added JGI Director  Nigel Mouncey . Hal Alper will be speaking on …
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Triggering Morel Fruiting
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … acquired from an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide … for every family of fungi. In the following guest piece, JGI user Dr. Tan details the results of the team’s work. …
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Corals in Hot Water Get Help From Their Microbes
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Better Genome Editing for Bioenergy
… at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica … negative if the gene is actually essential. Through the JGI’s  Community Science Program , the scientists thus set … of sgRNA sequences: six for every gene in the genome. The JGI  DNA Synthesis Science team synthesized these sgRNAs, …
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