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… A preview of how large-scale single cell genomics complements … In these springs, temperatures can reach as high as 80°C (~190°F), yet microbes thrive here. The communities in this … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … Additionally, CheckV was able to identify just over 17,000 contiguous sequences (contigs) of proviruses flanked …

… Novel archaeal lineage found in Yellowstone may have been important in early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … into the evolution of life on Earth. For decades, longtime JGI collaborator Bill Inskeep of Montana State University …

… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and … Instead, the partners stubbornly maintained complete autonomy; they can be isolated and grown separately from each …

… The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … mini genomes to match. As a result, they cannot process all of the chemicals they need to survive. To fill in their … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… Genome annotations of two C. citriodora subspecies broaden understanding of the … proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to … tissues of C. citriodora . From these samples, a total of 127 TPS loci were found, many of which had high sequence …

… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the virus had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the …

… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. Department of Energy …

… single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … large virions (700 nm in diameter) to much smaller virions (120 nm in diameter). Across the phylum  Nucleocytoviricota , …

… A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … (in this case, a plant’s complete genetic makeup) and 10 common gardens. We discovered that 8X populations have …

… user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, …

… key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user …