Results

Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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DAP-seq Drives Robust Mapping of Gene Regulation
… connection in a sprawling metropolis — an overwhelming challenge due to technical limitations and the sheer … The original DAP-seq method overcame some of these challenges by using  in vitro -expressed TFs and fragmented … species; stricter filtering criteria provides a robust community dataset of improved quality; deep insights …
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Learning to Look
… microbial genomes and 2,249 of the 6,412 (35 percent) metagenomes mined for this study. “We’re simply getting much … that enable systems-based scientific approaches to these challenges.  DOE’s Office of Science is the largest … States, and is working to address some of the most pressing challenges of our time. For more information, please visit  …
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The fungus that came in from the cold: dry rot’s pre-adapted ability to invade buildings
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… Webinar inviting researchers to submit white papers to the Community Science Program’s  Functional Genomics call for … Webinar inviting researchers to submit white papers to the Community Science Program’s  Functional Genomics call for … that enable systems-based scientific approaches to these challenges.  DOE’s Office of Science is the largest …
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High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Eelgrass Proves to Be Much Younger Than We Thought
… from the US Department of Energy Joint Genome Institute Community Sequencing Program (CSP 502951, 2016, Population …
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Cultivating Symbiotic Antarctic Microbes
… consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples … lakes in East Antarctica and enriched for native microbes. Metagenomes from enrichment cultures were sequenced and …
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Statement on the Use of Genomics Data
… Agreement (2003), the JGI recognized the need to engage the community to inform necessary changes to JGI data policies. … to uploading sequence data generated on behalf of its user community to NCBI as well as to the  data portals that the … DOE mandate to provide data access widely to the scientific community as soon as possible after data generation while …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Genomes that Paved the Way This project stems from a Community Science Program proposal that Martin submitted in … with dozens of partners. “This was a tremendous community effort, with over 100 researchers who nominated … to really get information on the functions of this fungal community, from the poles to the tropics.”  Francis Martin …
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