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MGM Workshop at Fisabio Summer School
June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale … University of Delaware BA in Biology, Boston University ( magna cum laude ) … Serrano et al. 2024.  Spatial …
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JGIota: Looking Back at Methane-Making Microbes
… and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial methane-makers. Eventually, that could help us … producing things like meat, milk, and wool. Hear more from JGI collaborators Sinead Leahy (New Zealand Agricultural …
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Supercharging SIP in the Fungal Hyphosphere
… automated aspects of a commonly-used process for studying microbial communities, with results published in the  … things like biomass and  biofuels . However, AMF and the microbial communities they inhabit are notoriously difficult … HT-SIP is a capability available to request through  the JGI proposal calls . … Work at Lawrence Livermore National …
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Microsatellite discovery from BAC end sequences and genetic mapping to anchor the soybean physical and genetic maps
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A single-base resolution map of an archaeal transcriptome
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities … Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer …
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Expanding Virophage Diversity
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which …
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Toward More Efficient Artificial Photosynthesis
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA … multi-carbon compounds through a light-driven process. The JGI’s  CSP Functional Genomics call is open year-round, and …
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NeLLi — Symposium on New Lineages of Life
… discoveries toward the evolution of cellular complexity and microbial symbiosis. Further, the symposium showcases … advancements that facilitate the shift from uncovering microbial novelties to deciphering metabolic and functional … History Roland Hatzenpichler, Montana State University Maggie Sogin, UC Merced   …
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Gut Fungi: Unexpected Source of Novel Chemicals
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … National Laboratory. The team’s research at both the JGI and EMSL was enabled by the Facilities Integrating … the fungi were making. So, Trent Northen , head of the JGI Metabolomics Technology Group, with scientists Ben Bowen …
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Cultivating Symbiotic Antarctic Microbes
… and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial communities that contribute to carbon cycling, and … were recovered—termed “metagenome-assembled genomes” (MAGs)—of the nanohaloarchaea strains Nha-R1 and Nha-C, which …
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