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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to … orange ripens only bitter, intensely sour fruit. Yet this plant, native to China and now disseminated around the globe, often as a rootstock for  Citrus , appeals in other ways. It better …
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Short sequence motifs, overrepresented in mammalian conserved non-coding sequences
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The JGI Data Portal: Improving User Experience
… Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is … Phytozome users who were seeking to download all the data associated with the latest version of the plant portal, weren’t able to complete this task. Improving …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… measurements of primary and secondary metabolites from plants, microorganisms, and environmental samples using … Program , along with Jenny Mortimer, Director of Plant Systems Biology at the Joint BioEnergy Institute … transcriptome analysis and 8 replicates for metabolomics. Why is this? A:  We did a pilot experiment with the JGI to …
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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A comparative genomics screen identifies a Sinorhizobium meliloti 1021 sodM-like gene strongly expressed within host plant nodules
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Transcriptional response of the white-rot fungus Dichomitus squalens to polysaccharides reveals a co-expression network of plant biomass conversion related genes
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The Exometabolome of Xylella fastidiosa in Contact with Paraburkholderia phytofirmans Supernatant Reveals Changes in Nicotinamide, Amino Acids, Biotin, and Plant Hormones
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Plant genotype and rhizobia strain combinations strongly influence the transcriptome under heavy metal stress conditions in Medicago truncatula
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Eucalyptus grandis MYB‐Like and RAN‐Like Zinc Finger Proteins Display Dual Roles in Regulating Plant Immunity and Symbiosis Pathways
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Hiroshi Otani
… is particularly interested in understanding how, when and why microbes decide to produce which metabolites. …
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Overview of the Genomes OnLine Database (GOLD)
… gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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