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Natural Prodcast Episode 22: Alison Narayan
… Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society … substrate scope of many enzymes. And so we have limited information. There’s a lot of work to do, and that makes … a great area to operate in, because there’s just so much information that we still need, and that’s the kind of …
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using surprisingly few enzymes. The Science … corn variety and protect maize by fending off fungal and microbial infections. Scientists had assumed that maize … sesquiterpenoids, National Science Foundation Plant-Biotic Interactions Program (grant no. 1758976 to E.S. and P.Z.) …
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JGI on the 2020 Highly Cited Researchers List
… those recognized by Clarivate Analytics as “true pioneers in their fields over the last decade, demonstrated by the … that led to the release of 52,515 publicly-available microbial draft genomes generated from environmental samples … Program, and already available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Nikos …
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An Integrated Dataset to Understand Ecosystem Interaction
… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand … Berkeley National Laboratory (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … States. They also provided multiple access points to the information. The team harnessed a community-science program to …
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for … of desert grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean … in the December 2024 review. You can also find more information about the JGI’s various proposal calls here. …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … the gene function and add additional biological information. As I’ve said earlier, 16 to 56 percent of plant … us to add expression-derived additional biological information to an average of 40 percent of genes across Gene …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a … multicellular development. “DAP-Seq is the main source of information in the project,” Nagy added. “Since the FUNCODE is … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics … your Tree ever differ from NCBI Taxonomy? A(nswer): If you find that our trees are incorrect or need to be changed, please contact us and we’ll … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. This year, a new group at the Lab, the Sustainable Garden Club, hosted a DIY Succulent Workshop and … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have … to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … diverse metabolic capabilities offer insights into how microbial processes might be harnessed for applications …
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