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Enlarging Windows into Understanding Gene Functions
… bind quickly and efficiently in the genome by adding tagged transcription factors to a genomic DNA library. “It’s … their functional interpretation is as tough as it has been 10 years ago,” he said. “We thought about reconstructing … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Multi‐omic analyses of exogenous nutrient bag decomposition by the black morel Morchella importuna reveal sustained carbon acquisition and transferring
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Brachypodium distachyon genotypes vary in resistance to Rhizoctonia solani AG8
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Virocell Necromass Provides Limited Plant Nitrogen and Elicits Rhizosphere Metabolites That Affect Phage Dynamics.
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JGI Early Career Researchers Featured in mSystems Special Issue
… article, Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell … sequence reads to link mobile elements such as plasmids to microbial host cells. In a separate article, research …
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Synthesis
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NeLLi — Symposium on New Lineages of Life
… discoveries toward the evolution of cellular complexity and microbial symbiosis. Further, the symposium showcases … and functional capabilities. Overview of Symposium Goals Metagenomic and single-cell sequence data have provided a … Schulz,  New Lineages of Life Lead Emiley Eloe-Fadrosh, Metagenome Program Tanja Woyke, Microbial Program Robert …
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Host genotype and age shape the leaf and root microbiomes of a wild perennial plant
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JGI@25: The Little Alga That Could
… specific algae. The reference genome is cited in roughly 10% of all since-released publications on green algae. “The …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea … these vents, and underwater volcanoes,  researchers studied microbial communities across five oceanic regions. In doing … at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the … tolerant CAM plants, Agave deserti and Agave tequilana. BMC Genomics  14, 563. May D, Blow MJ, Kaplan T, McCulley DJ, … Tringe SG, Visel A , Woyke T, Wang Z, Rubin EM (2011). Metagenomic discovery of biomass-degrading genes and genomes …
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What Happens Underground Influences Global Nutrient Cycles
Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming through the … interact below the ground, influencing the production of microbial greenhouse gases and volatile organic compounds. … omics and computational resources with JGI’s cutting-edge genomics, DNA synthesis and complementary capabilities. …
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