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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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Biotech Partners Summer Intern Co-Authors NAR Paper
Kaushal Sharma, one of five Antioch High School rising juniors who … through the Biotech Partners program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates and …
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The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown‐rot mechanism involving Fenton chemistry
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Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii
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Examining the Relationship Between the Testate Amoeba Hyalosphenia papilio (Arcellinida, Amoebozoa) and its Associated Intracellular Microalgae Using Molecular and Microscopic Methods
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Shared Genomic Regions Between Derivatives of a Large Segregating Population of Maize Identified Using Bulked Segregant Analysis Sequencing and Traditional Linkage Analysis
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
In microbial mats, communities of microorganisms live among viruses that infect them. But what trends govern those … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. …
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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The Case for Conservation
… help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, … technologies applied to the effort. The Impact Found on all continents, including Antarctica where it is a major … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Building on Experience, With a Twist?
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Emiley Eloe-Fadrosh
… ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to identify and characterize genomic … (MIMAG) of bacteria and archaea. Nature Biotechnol. 35, 725-731. Paez-Espino D, et al. 2016. Uncovering Earth’s …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or harm … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and Reconstruction of the Plant Microbiota (SPP DECRyPT 2125)’ and the Cluster of Excellence on Plant Sciences …
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