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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
In   April 2020, we mark both the 50th celebration of Earth Day on April … 22, and DNA Day on April 25.  On March 17, 2020, a shelter-in-place order for all residents took effect in six San …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy Spencer Chair in Genomics at the … was a group lead at Stanford Human Genome Center directed by Richard Myers, and among the Center staff that moved to … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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Year in Review: JGI’s 2018 Progress Report Available Now
… highlights notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest … of California, Berkeley aims to redesign and engineer algae by identifying the algal regulators that could boost lipid … severity wildfire.  Eight of the approved proposals are led by researchers, including Nelson and Roth, who have not been …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant … of plants have resulted in a paper published October 5, 2020 , in Nature Biotechnology . Kellogg and her colleagues, …
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JGI Earth Month: Wetlands Work in #TenHundredWords
April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant … in California’s manmade water transport canals. Inspired by Randall Munroe’s xkcd comic “Up Goer Five” and his …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … Additionally, 40 percent of the proposals were submitted by researchers who had not been a primary investigator on …
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Tracking the Origins of Methane-Producing Microbes
Mini-Metagenomics Approach Helps Identify Novel Archaeal … three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or hydrogenotrophic (most common); … The archaeal genome was detected in samples collected by Stephen Quake’s team at Yellowstone National Park’s …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became … samples in support of user science.  Capabilities offered by the platform are a result of Dr. Louie’s establishment of … Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to … of products, making data easier to access and use, and by investing in the latest advanced genomic capabilities to … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … is depth stratified, rainfall dependent, and is mediated by genomically divergent microorganisms. Nature Microbiology … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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