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Monitoring Inter-Organism Interactions Within Ecosystems Latest … of California, Berkeley aims to redesign and engineer algae by identifying the algal regulators that could boost lipid … severity wildfire.  Eight of the approved proposals are led by researchers, including Nelson and Roth, who have not been …

Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant … called Less Shattering 1 (SvLes1); gene editing studies led by co-first author Pu Huang confirmed that it was involved …

Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant … in California’s manmade water transport canals. Inspired by Randall Munroe’s xkcd comic “Up Goer Five” and his … abstract from a 2019 conference. Both versions appear side-by-side below: Kaze was part of the  2018 cohort of the …

… and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … Additionally, 40 percent of the proposals were submitted by researchers who had not been a primary investigator on …

Mini-Metagenomics Approach Helps Identify Novel Archaeal … The archaeal genome was detected in samples collected by Stephen Quake’s team at Yellowstone National Park’s … The researchers applied mini-metagenomics to these samples by sorting the microbes into small pools of cells that were …

Dr. Louie joined the JGI in 2014 to develop the metabolomics program, … samples in support of user science.  Capabilities offered by the platform are a result of Dr. Louie’s establishment of … metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and development of … Sci Rep. 2013;3: 1656. … Education … Selected Publications …

… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … is depth stratified, rainfall dependent, and is mediated by genomically divergent microorganisms. Nature Microbiology … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …

The Integrative Genomics Building (IGB) seen above is home to … of products, making data easier to access and use, and by investing in the latest advanced genomic capabilities to … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …

In honor of the JGI's 25th anniversary in 2022, we have … for her work on CRISPR-Cas9, technology described by the Nobel Foundation as having “a revolutionary impact on … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …

In honor of the JGI's 25th anniversary in 2022, we have … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … improve the genome’s accuracy, and increase its length by 29.5 Megabasepairs. 2017: Pan-genome analysis of sorghum …

In April 2020, we mark both the 50th celebration of Earth … the question, well, how are the microbes being affected by the metals? When metals are introduced, how do they adapt by changing what macromolecules are in their biomass, …