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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Gut Fungi: Unexpected Source of Novel Chemicals
The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest their last leafy meal. In their evolutionary history, these … diversity; the team identified what looked to be three groups of novel compounds, as well as (potentially) one …
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … years ago, cyanobacteria acquired the ability to produce their own food and generate oxygen as a byproduct. The … was an anaerobe revealed that the ancestor of all these groups may have been an anaerobe who relied on fermentative …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut … including mating and fruiting, which is worth further investigation.   … The U.S. Department of Energy Joint …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
A special issue of Synthetic Biology celebrates research enabled by the JGI … which started in 2012, and what they’ve discovered through their collaborations. One review article in the collection, … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… came onsite. From data carpentry to science communications, their schedules were filled with trainings that they later … Interns Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran Madichetty and mentors TBK … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth …
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Extracting the Secrets of Secondary Metabolites
… survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … CRISPR provides researchers with a powerful addition to their toolkit to study gene function. As a demonstration, … because it allows researchers to delete or activate certain genes and assess how these edits affect functionality.  …
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Evolution of a multi‐step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhancer‐binding protein triggers acid‐activated gene expression
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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A Synthetic Gene Library Yields a Previously Unknown Glycoside Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β‑Linked GlcNAc Polysaccharides
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … algae. Scientists can use PhycoCosm’s genome browser to see their favorite alga’s predicted genes and their …
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Nick Everson
Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI … Joint Genome Institute after serving as the Chief Operating Officer of the DOE Joint Bioenergy Institute and the …
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