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Comparative genomics of the extremophile Cryomyces antarcticus and other psychrophilic Dothideomycetes
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Comparative mitogenomics of kingdom Fungi – evolutionary insights and metagenomic applications
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for … who nominated species for sequencing and then sent DNA and RNA samples to JGI,” Grigoriev said. All of these …
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Introduction: Sequences and consequences
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Targeted single‐cell sequencing
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership … of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria … reverse genetics to test those hypotheses. From 2011 – 2015, she worked with Sabeeha Merchant at UCLA as a NIH Ruth L. …
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JGIota: Sequencing Shiitakes with David Hibbett
… David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using samples … a combination of really cutting-edge genomics and genetic analysis with large scale data collection,” he added. Jeremy …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee … best ways to study such viruses is by sequencing the bulk DNA or RNA contained in a sample that has been collected … hydrothermal vents – and computationally identifying which sequences represent viruses that were present in the sample. …
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Bioinformatic analysis of the distribution of inorganic carbon transporters and prospective targets for bioengineering to increase Ci uptake by cyanobacteria
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Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution
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