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… of metagenomic assembly and binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil …

Microbial communities living near hydrothermal deep-sea … these vents, and underwater volcanoes,  researchers studied microbial communities across five oceanic regions. In doing … survive in very hot, high-pressure and chemically-rich ecosystems. This means they hold clues for understanding how …

… as a first-year graduate student in the Quantitative Systems Biology (QSB) Group under the School of Natural … Ben Cole on a project involving bacteria in Arabidopsis plant roots. At the same time, Lawrence worked with Nicole … there was no mechanism for it,” he recalls. He arranged a meeting with the SNS dean, Juan Meza , who was very familiar …

Genome R&D Group and is one of more than 100 scientists and systems engineers involved in computational work at the JGI. … function (Héctor García Martin of Berkeley Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying …

… natural products, including new ones. The Impact In the past, natural products have been an important source of … compounds may also be involved in how the fungi metabolize plant biomass, which could inform how scientists can more easily convert plants into carbon-neutral biofuels . What’s more, many …

For Guillaume Borrel and Simonetta Gribaldo of the Institut Pasteur in France, the importance of methanogenesis and the … issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

… fungi, excerpted from his talk at the 2015 JGI Annual Meeting:   Francis Martin on how JGI has changed mycology, excerpted from his talk at the 2015 JGI Annual Meeting:         … Laccaria bicolor on MycoCosm … Laccaria …

… available the annual JGI Genomics of Energy & Environment Meeting in San Francisco …

Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. … aim to inform the engineering of stable, synthetic microbial communities to take advantage of their joint … Blow, and their team have also harnessed CRAGE to create a plant-fertilizing microbiome. In work  reported in  Applied …