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Calculating the Costs of Multiple Switchgrass Gene Copies
… at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the … of genomic, quantitative genetic, landscape, and niche modeling approaches, we contrasted the diversity of 4X and … (8X)-specialist (4X) tradeoff. Furthermore, niche modeling suggests niche evolution between 4X and 8X linked …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an … the aim of intensifying collaborations in the fields of genomics, structural biology, bioimaging, and water … science, energy conversion and water treatment as well as microbial ecology with a focus on metabolism and ecosystem …
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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Learning to Look
… expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of … a computer could use to conduct a similar type of search in microbial and metagenomic databases. In this case, the … Simon Roux, a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less … These experiments focused on two species at once: the model legume species  Medicago truncatula and the … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less …   These experiments focused on two species at once: the model legume species  Medicago truncatula and the … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Yasuo Yoshikuni
… of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, … group. His research focus includes engineering of non-model yeasts for production of biofuels and renewable … sugar polymers in macroalgae and developing the first microbial platform technologies unlocking the potential of …
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Hiroshi Otani
Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. His research activity is focused on developing and implementing new technologies and … H, Mouncey NJ. New keys to unlock the treasure trove of microbial natural products. Nat Rev Microbiol. 2021 …
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Sequencing Technologies
… molecular capabilities and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and … They apply Lean Six Sigma practices to process optimization and development approaches, testing various platforms to see what works best for applications. The team works hand in hand with the Project Management …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the … because they often need unique conditions and a specific microbial host to replicate. Sequencing genetic material … in soil microbiomes could allow for more accurate ecosystem modeling. In a different vein, characterizing CRISPR defense …
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Predominant Acidilobus-Like Populations from Geothermal Environments in Yellowstone National Park Exhibit Similar Metabolic Potential in Different Hypoxic Microbial Communities
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