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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and … Wilkins, Colorado State University GI users and microbiome researchers Mike Wilkins and his graduate student Kaela … deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
This series is the story of a giant metagenome assembly from Wisconsin’s Lake … terabytes of data with MetaHipMer2. And the National Energy Research Scientific Computing (NERSC) has another … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …
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Genome Sequence of Oceanicola sp. Strain MCTG156(1a), Isolated from a Scottish Coastal Phytoplankton Net Sample
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In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes
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Genome Sequence of Roseovarius sp. Strain MCTG156(2b) Isolated from a Phytoplankton Net Trawl on the Scottish West Coast
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
Johnston for followup questions.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to … Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began … plant genomes. She has appeared on the annual Highly Cited Researchers list assembly by Clarivate Analytics. In 2020, …
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JGIota: Sequencing Shiitakes with David Hibbett
David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … mycobiont. However, despite a century-and-a-half of lichen research, many of the symbiosis’ details remain unclear. For … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and …
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Neha Varghese
… key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
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Draft Genome Sequence of Methylocapsa palsarum NE2T, an Obligate Methanotroph from Subarctic Soil
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