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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three groups focused on HTP DNA … view to developing a deeper understanding of sequence-based gene function. … B.Sc. (HONS) – University of Wales, Cardiff, Genetics Ph.D. – University of Cambridge., Microbial …
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Bioenergy sorghum stem density increases threefold following internode elongation due to continued accumulation of lignified cell walls and complex regulation of genes involved in cell wall biosynthesis
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of … across a spectrum of burned soils. By connecting microbial genes with functions useful for forest recovery, this study … interact; beyond bacteria, these samples harbored fungal genomes, including a novel Leotiomycetes species and …
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — … and metagenome , rather than just by 16S ribosomal RNA gene censuses.  Emiley Eloe-Fadrosh ,  Metagenome Program … researcher Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program lead Igor Grigoriev took readers on …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its … Dr. Mouncey has a long-standing interest in microbial genetics that started with his education and carried forward … to learn more about the program's areas of focus, major initiatives and more.  …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper … event that occured some 60 million years ago. Massive gene loss, rampant gene duplications, and even more ancient gene transfers from … The work conducted by the US Department of Energy Joint Genome Institute is supported by the Office of Science …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … refine and improve the process of finding novel Cas genes and CRISPR systems. The collaboration has resulted in … Combining forces with UC Berkeley to seek elusive gene-editing proteins …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, … genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More recently, these … but we can already provide raw mapping files as well as gene- and contig-level coverage. Other related products Q:  …
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Expanding Virophage Diversity
… are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages … viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid proteins (MCP and … includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they were able to identify 44,221 total virophage …
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Refining the Process of Identifying Algae Biotechnology Candidates
… to summary above^ as well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly … stresses, and its transcriptome to learn more about which genes expression patterns. The analysis led to the identification … was supported by the Bioenergy Technology Office (BETO) within the Department of Energy’s Office of Energy Efficiency …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We … This process enables our users to explore the genetic makeup of microbial communities, shedding light on …
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