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Critical Assessment of Metagenome Interpretation: the second round of challenges
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Restoration of biofuel production levels and increased tolerance under ionic liquid stress is enabled by a mutation in the essential Escherichia coli gene cydC
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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A sorghum genome-wide association study (GWAS) identifies a WRKY transcription factor as a candidate gene underlying sugarcane aphid (Melanaphis sacchari) resistance
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CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
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JGI@25: Fueling Investigation into Methane-Making Microbes
… our collaborations and capabilities to enable great science that will help solve energy and environmental ch … livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded reason … Since 2010, the JGI has partnered with researchers around the world to map out genomes of rumen microbes. In …
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The More the Merrier: Making the Case for Plant Pan-genomes
… plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are … Universidad de Zaragoza and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… our collaborations and capabilities to enable great science that will help solve energy and environmental … directly from samples sidesteps these challenges, since it doesn’t require this kind of lab culture. Beginning in the … Kyrpides at the JGI led a team that combed datasets from around the world, finding over 125,000 partial and complete …
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Evolution of a multi‐step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhancer‐binding protein triggers acid‐activated gene expression
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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A Synthetic Gene Library Yields a Previously Unknown Glycoside Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β‑Linked GlcNAc Polysaccharides
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JGI@25: The Little Alga That Could
… our collaborations and capabilities to enable great science that will help solve energy and environmental … challenges. Chlamydomonas is a single-celled alga with a unique place in evolutionary history. Retaining … require the nutrient copper for photosynthesis; Chlamy does not. When the lab reopened, Merchant would go on to …
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