Results

CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
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JGI@25: Fueling Investigation into Methane-Making Microbes
… our collaborations and capabilities to enable great science that will help solve energy and environmental ch … livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded reason … Since 2010, the JGI has partnered with researchers around the world to map out genomes of rumen microbes. In …
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The More the Merrier: Making the Case for Plant Pan-genomes
… plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are … Universidad de Zaragoza and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… our collaborations and capabilities to enable great science that will help solve energy and environmental … directly from samples sidesteps these challenges, since it doesn’t require this kind of lab culture. Beginning in the … Kyrpides at the JGI led a team that combed datasets from around the world, finding over 125,000 partial and complete …
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Evolution of a multi‐step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhancer‐binding protein triggers acid‐activated gene expression
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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A Synthetic Gene Library Yields a Previously Unknown Glycoside Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β‑Linked GlcNAc Polysaccharides
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JGI@25: The Little Alga That Could
… our collaborations and capabilities to enable great science that will help solve energy and environmental … challenges. Chlamydomonas is a single-celled alga with a unique place in evolutionary history. Retaining … require the nutrient copper for photosynthesis; Chlamy does not. When the lab reopened, Merchant would go on to …
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Daniel Udwary
… of bioinformatics tools for elucidation of biosynthetic gene clusters in bacteria and fungi. Prior to joining the … at Warp Drive Bio, and as a bioinformatics HPC consultant with NERSC. Dr. Udwary co-hosts JGI’s "Natural Prodcast" … chat"-style podcast about natural products and the science and scientists of secondary metabolism. … PhD in …
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Game On: High School Students Drive Everglades Metagenomics Study
The course had a defined set of objectives, and started with an image of a spoonful of dirt with the question: Do … Metagenome Program Head at the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it …
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Ray Turner Completes Last Tour of Lab Duty at JGI
Michael Brandt (Operations Deputy), Horst Simon (Science Deputy), Jeff Blair (Chief Laboratory Counsel) and … before the event segued to remarks by the leadership of the DOE Office of Biological and Environmental Research: … tribute wrote, “Thanks for all you’ve done for users around the world, DOE, Berkeley Lab, JGI, for your …
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