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Jasmyn Pangilinan
… tools and analysis support for user science, with a focus on metagenomes. Passionate about automation and collaboration, she works to …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  … a colored-in page of that book. Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv … one of the project co-leads and first author of the study. Members of the Tel Aviv and NCBI teams, who were …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, … strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This program has … training in Biochemistry, University of Washington …
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DAP-seq Drives Robust Mapping of Gene Regulation
… assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like … hard to make them work for the kinds of plant samples we study — and even go beyond, putting four different species … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Four Researchers Join JGI User Executive Committee
… of Energy user facility located at Lawrence Berkeley National Laboratory. Holly Bik of the University of Georgia, Greg Bonito of Michigan State University, Jonathan Eisen of the … data and expertise to the global research community to study complex biological and environmental systems. The …
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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The meeting was a hybrid event, with … great impact on these algal blooms. So Vardi and his group study one specific alga,  Emiliania huxleyi  (sequenced by …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks … For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By … a limiting factor – before or after flowering. For the study, the team grew two sorghum varieties: one that …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for … genomes, but unfortunately there are not many available to study. This is because most fungal clades have no reference … (Module 1), Experimental Design and Sample Metadata (Module 2), Sample Collection and Processing (Module 3), Data …
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working … JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in professional development … Evolution of the Mitochondria Internship … Cross Species Integration of Single Cell Transcriptomes …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a … Remarkable Similarity Despite Vast Diversity For this study, researchers collected soil samples from four sites: … of these varied biomes; the forests share only about 20% of their fungal species. To make useful comparisons, the …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will bring together … and applying laboratory ecosystems to help transition microbiome science from largely observational to … the future of microbiome science. Organizers The EcoFAB 2025 Conference is organized by the EcoFAB Steering …
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