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The western redcedar genome reveals low genetic diversity in a self-compatible conifer
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … Impact This dataset gives researchers a new foundation for studying how fungi produce and manage energy at the cellular … First, they scanned over 26,000 publicly available metagenomes in the JGI's IMG portal for mitochondrial …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … too costly for them. The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help … making. So, Trent Northen , head of the JGI Metabolomics Technology Group, with scientists Ben Bowen and Katherine …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint … Kaushal‘s mentor, described his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic locations and assign …
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The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new … rot ( Serpula lacrymans ) is so destructive in houses. A study involving six brown rot fungi reveals the genomic … to sustainable, alternative biofuels and bioproducts. This study lends insights on how the fungus has responded to …
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The JGI Data Portal: Improving User Experience
… human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at …
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A Multiomic Approach to Understand How Pleurotus eryngii Transforms Non-Woody Lignocellulosic Material
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How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity?
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Exploring the loblolly pine (Pinus taeda L.) genome by BAC sequencing and Cot analysis
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Exometabolomics and MSI: deconstructing how cells interact to transform their small molecule environment
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Transcriptomic Analysis of the CAM Species Kalanchoë fedtschenkoi Under Low- and High-Temperature Regimes
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment … their functional roles in their community. This study shows how the function-driven, single-cell screen can … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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