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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and … was made possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by … Cas14 proteins on IMG/M portal …
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Virocell Necromass Provides Limited Plant Nitrogen and Elicits Rhizosphere Metabolites That Affect Phage Dynamics.
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What Happens Underground Influences Global Nutrient Cycles
… alga  Chlamydomonas reinhardtii , one of the JGI’s Flagship genomes. She and her colleagues have generated a … experiment in the Sierra Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming through the …
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MGM Workshop at Fisabio Summer School
… June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… and Exploring Novel BGC Detection Techniques on Fungal Genomes Video Transcript: Emerald Nash : What I’m working on … that I got to do a project involving over 12,000 fungal genomes was just really, really exciting for me and learning …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy …
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A Complex Confection Decoded: Sugarcane Reference Genome
… The work (proposal: https://doi.org/10.46936/10.25585/60001084 and https://doi.org/10.46936/10.25585/60001194) conducted by the USA Department of …
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JGI@25: The Little Alga That Could
… impact. Her lab has sequenced four additional green algal genomes using Chlamy as a reference for functional …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… metatranscriptome datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. … aim to inform the engineering of stable, synthetic microbial communities to take advantage of their joint …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… in Complex Systems (LRC) in Menlo Park, Calif. In the June 24, 2022, issue of the journal Science, Volland and … in coastal sediments,” said Woyke, who also heads the JGI’s Microbial Program and is one of the article’s senior … level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab also used a labeling …
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