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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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Kanwar Singh
Kanwar spends part of his time assisting JGI users by processing their single cell samples using our …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests … gene clusters in bacteria and fungi. Prior to joining the JGI, he spent time as a faculty member at the University of … metabolism. … PhD in Chemistry, Johns Hopkins University (2003) MS in Chemistry, Johns Hopkins University (2000) BS in …
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Benjamin Cole
… … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … List of pubs available on NCBI … Implementation of …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in … of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … in bacterial RiPP biosyntheses. J Ind Microbiol Biotechnol. 2023 Feb 17;50(1):kuad005.  Otani H, Udwary DW, Mouncey NJ. …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … and it feels so rewarding,” Wint said. For Axel Visel, JGI Science Deputy and a co-founder of the internship … in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to correctly … crop false flax – genomes that have been sequenced by the JGI – and the common strawberry, which is octoploid (eight …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new … school.  The interns from this cohort and their respective JGI mentors are: Ruoxi Zhao and mentor Margot Bezrutczyk … Yumary Vasquez : So this summer what I learned at the JGI is how to really work in the government lab. And I find …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … When Lawrence embarked on his PhD program at UC Merced in 2013, this field was just beginning to develop and expand … to develop a tool that leveraged machine learning to help users determine which computer program would best serve …
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Forest Fungi, Seagrass, and a New View of Symbiosis
Three stories of JGI-supported research, connected to nutrient cycles. …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with … own perspectives. The interns from this cohort and their JGI mentors are listed below, along with their project focus … and the fact that I got to do a project involving over 12,000 fungal genomes was just really, really exciting for me …
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At the Forefront of Terrestrial Virus Research
Matthew Sullivan. He shared a few thoughts on his summer at JGI through a program that provides graduate thesis research …
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