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A Powerful Technique to Study Microbes, Now Easier
… Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure …
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An Automated Tool for Assessing Virus Data Quality
… the completeness of these sequences and complements a community effort to develop guidelines and best practices … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and guidelines for providing the minimum amount of information for an uncultivated virus genome. CheckV has …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… our collaborations and capabilities to enable great science that will help solve energy and environmental ch … map out genomes of rumen microbes. In 2018, through a JGI Community Science Program proposal that started six years earlier, researchers …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … RNA transcripts. All sequencing was done through the JGI Community Science Program . Using an ecology metric called beta diversity, the … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… mimicking an array of microbial life. By leveraging massive user-generated datasets at the JGI and other publicly … forms of communication. This intricate code carries the information necessary for life's processes, making it a … supports the DOE Biological and Environmental Research program’s efforts to build predictive models for the …
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The fungus that made itself at home
… Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic information from similar organisms, researchers have gained … at the Joint Genome Institute, a DOE Office of Science User Facility, compared the genomes of two strains of fungi …
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Ecological and genomic responses of soil microbiomes to high-severity wildfire: linking community assembly to functional potential
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Impact of fire on active layer and permafrost microbial communities and metagenomes in an upland Alaskan boreal forest
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Rapid Response of Nitrogen Cycling Gene Transcription to Labile Carbon Amendments in a Soil Microbial Community
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Flooding and ecological restoration promote wetland microbial communities and soil functions on former cranberry farmland
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Phototrophic Co-cultures From Extreme Environments: Community Structure and Potential Value for Fundamental and Applied Research
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Patterns and ecological drivers of viral communities in acid mine drainage sediments across Southern China
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