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Genomes of multicellular algal sisters to land plants illuminate signaling network evolution
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Comparative Genomics and Transcriptomics Analyses Reveal Divergent Plant Biomass-Degrading Strategies in Fungi
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Holo‐omics disentangle drought response and biotic interactions among plant, endophyte and pathogen
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Label-free structural imaging of plant roots and microbes using third-harmonic generation microscopy
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped … to Antarctica’s photosynthetic mats — to reveal how these systems adapt and contribute to global biogeochemical … in sustainable biofuel and bioproducts production, global carbon and nutrient cycling, and biogeochemistry.  You can …
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Accelerating Metagenomics Discoveries with Deep Learning
… are utilizing deep learning to automatically generate insights from metagenomic data. In deep learning, a branch … Genome R&D Group and is one of more than 100 scientists and systems engineers involved in computational work at the JGI. … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying …
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Silver age of GOLD introduces new features
… scheme to better define the genomic information and ecosystems. These curated data are accessible on JGI data portals including the Integrated Microbial Genomes & Microbiomes (IMG/M) system, enhancing … of meters, temperature in centigrade, and more.  The four level project organization system implemented in GOLD …
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Building Wet and Dry Lab Skills
… Mikes worked with mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study the effects of  … really good at it. Tamyra Long : I feel like I opened a new level of confidence because coming here in the beginning, … overall. So I feel like I'm leaving here with opening a new level of confidence. Zyiah Mikes : Like Tamyra said, …
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Nikos Kyrpides
… the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior … al. 2020. A scoutRNA Is Required for Some Type V CRISPR-Cas Systems. Mol Cell . S1097-2765 Schulz F, et al. 2020. Giant …
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How to Target a Microbial Needle within a Community Haystack
… strides in generating genome sequences for members of the microbial world through bulk community sequencing … of HCR-FISH+FACS for selectively enriching low abundance microbial groups from complex natural communities. This type …
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You Can Move, But You Can’t Hide
… plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  recently described in  Nature … EDGE platform. The Impact In order to gain more insights into Earth’s ecosystems, researchers must examine … the genomics of MGEs and their evolution at the cellular level, scientists can better understand ecosystem-wide …
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Analysis of the Phlebiopsis gigantea Genome, Transcriptome and Secretome Provides Insight into Its Pioneer Colonization Strategies of Wood
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