Results

Metagenomics Reveal Dynamic Coastal Ocean Reservoir of Antibiotic Resistance Genes
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Depth-resolved paired metagenomes and metatranscriptomes from the Lake Erie ‘dead zone’
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in … of XX. But, like some plant and songbird species, the system in shrub willow is flipped: females are … This work was supported by the NSF Dimensions of Biodiversity Program …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … the collective power of more than 26,000 microbiome datasets, all accessible through the publicly available  … (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now …
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Building Wet and Dry Lab Skills
… Summer 2025 marked the second year of Alabama A&M University students coming to the DOE Joint Genome Institute for research and training experience funded by a DOE … the User Support Analysis team to analyze plant microbiome data via programming languages like Python. The more …
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Microfluidic-based mini-metagenomics enables discovery of novel microbial lineages from complex environmental samples
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Cell-free prototyping enables implementation of optimized reverse β-oxidation pathways in heterotrophic and autotrophic bacteria
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Proteome reallocation enables the selective de novo biosynthesis of non-linear, branched-chain acetate esters
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden … Australia but is increasingly farmed in other countries for essential oil production. The recent assembly of two … from a biofuels production perspective. By using genomic database alignment tools, researchers searched for TPS genes …
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Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
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