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John Vogel
… regulation, abiotic stress tolerance, and the mechanisms by which plants interact with their microbiomes. In … sorghum from seedling to maturity reveals biotic and metabolic responses. Proc. Natl. Acad. Sci. 116 (52) … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …
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What Happens Underground Influences Global Nutrient Cycles
… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, … mutant library in Chlamy, as the alga is colloquially known by researchers. A missing gene from this mutant library … reaction networks, and also assessing the role of viruses in the soil microbiome. Another accepted proposal in …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … sequencing or DAP-seq. The technology was developed by Ronan O’Malley , who leads the Sequencing Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on … Genomes (IMG) family of systems. Before joining LBNL in 2006, she was Director of Application Development Systems at … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …
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David Goodstein
With a background in experimental and computational surface physics, Dr. … et al., 2020.  Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, … LA, Visel A (2013). Fine tuning of craniofacial morphology by distant-acting enhancers. Science 342, 1241006. Visel A …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions … resources. Q:  Where can I get information for funding by JGI? A: The JGI is not a funding organization. Rather, it … Data Analysis – Tips from Users page.  Q:  Is the metabolic study able to build a profile for a not very well …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome … from Chlamydomonas reinhardtii reveals continuous cell and metabolic differentiation. The Plant Cell . 27: 10, … Award for Research Excellence … Education … Selected Publications … Awards and Honors …
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The Fungi That Survive In Antarctica
… of Tuscia researchers Laura Selbmann and Claudia Coleine are working with scientists from around the world – and the JGI – to …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome … in human and mouse triglyceride metabolism. He is funded by DOE and through continued competitive grant support from … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast …
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Decoding Yellowstone’s Microbial Mats
… it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two billion years ago. A team of researchers … Yellowstone National Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered …
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