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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy … litter and to incorporate the assimilated carbon into the soil, reducing the amount of CO2 emissions from decaying … while increasing the organic matter and fertility of the soil. Morels (Morchella spp.) were previously considered …
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JGI@25: Using Team Science to Build Communities Around Data
… Research (INRAE) focused on in-depth exploration of ecology-related groups of fungi. The 1KFG project has … from James Leebens-Mack of the University of Georgia, along with 100 of his colleagues in the comparative plant … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this … Yasuo Yoshikuni is the DNA Synthesis Science Program Head at the JGI. Click to learn more about the program's … B.E. in Biological Science and Technology, Tokyo University of Science, …
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Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
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Draft genome sequence of Pseudomonas extremaustralis strain USBA-GBX 515 isolated from Superparamo soil samples in Colombian Andes
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Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T)
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … impacts on the global nutrient cycles regulated by their hosts. For example, microbes that capture and store carbon … how nutrient availability, or lack thereof, impacts viral infection and the metabolism of the resulting …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. … that allow it to access nutrients easily from a variety of soils and has a high tolerance of extreme water conditions … P. hallii var. filipes (94.8% complete) and resequenced a host of natural collections from across the species range. …
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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Meta-omics survey of [NiFe]-hydrogenase genes fails to capture drastic variations in H2-oxidation activity measured in three soils exposed to H2
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 … by the community regarding the use of JGI data prior to publication by the principal investigators. To resolve these …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Bacterial enzymes play second fiddle to those from fungi when … Pinpointing the processes happening on and in forest soil also better enriches models of global carbon and … needed to build a detailed database on the denizens in the soil. While large protein databases, like UniProt, exist, …
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