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Enlarging Windows into Understanding Gene Functions
… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … factors that control how genes are turned on is known as DNA affinity purification sequencing or DAP-seq. The … TFs and regulatory networks are conserved across fungi.” Using multiDAP-seq, Nagy’s team is comparing five fungal …
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Qualitative and quantitative resistances to leaf rust finely mapped within two nucleotide‐binding site leucine‐rich repeat (NBS‐LRR)‐rich genomic regions of chromosome 19 in poplar
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The JGI Data Portal: Improving User Experience
… from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a … of making data more findable and easier to download is a complex one, so our joint team started small, in the … work on IMG and GOLD,” said Steve Wilson, head of the JGI’s Systems Engineering Group. “Our team’s ultimate goal is to …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … Chlamydomonas has this related protein that’s also causing DNA damage,” Merchant said, “that something is wrong with …
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Boosting Small Molecule Production in Super “Soup”
… still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … to increase the productivity rates for pathways of varying complexity. Rasor cautioned that further optimization is … are partnering with Yasuo Yoshikuni and Ian Blaby of the DNA Synthesis Science Program . “This collaboration brings …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… design will target sustainable energy solutions, focusing on lignocellulosic thermophiles and polymer … degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s … bringing together diverse expertise to address complex scientific questions.”  Of these 18 scientists, …
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Site-Selective C–H Halogenation Using Flavin-Dependent Halogenases Identified via Family-Wide Activity Profiling
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Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria
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Uncovering secondary metabolite evolution and biosynthesis using gene cluster networks and genetic dereplication
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Functional Genomics of Novel Secondary Metabolites from Diverse Cyanobacteria Using Untargeted Metabolomics
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Detection of S83V GyrA mutation in quinolone-resistant Shewanella algae using comparative genomics
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Grasses use an alternatively wired bHLH transcription factor network to establish stomatal identity
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