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Enlarging Windows into Understanding Gene Functions
… affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a dizzying array of combinations, are unremarkable, save perhaps for the absence of all the … what TFs and regulatory networks are conserved across fungi.” Using multiDAP-seq, Nagy’s team is comparing five …
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Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass
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Comparative analysis of GT14/GT14-like gene family in Arabidopsis, Oryza, Populus, Sorghum and Vitis
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… eye, microscopy reveals unexpected complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … threads floating delicately above the leaf debris are revealed to be single bacterial cells, visible to the …
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Genome sequence of Microvirga lupini strain LUT6T, a novel Lupinus alphaproteobacterial microsymbiont from Texas
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Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1T, an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake
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Dan Rokhsar
… the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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Training the Next Generation of Talent
DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the University of … by both Meza and DOE JGI Director Eddy Rubin. “QSB faculty are active DOE JGI Community Science Program collaborators, …
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Crysten Blaby-Haas
Materials Initiative, a partnership between JGI and the Molecular Foundry, a nanoscale research and … in metal homeostasis. She began her independent research career at Brookhaven National Laboratory (2015) where she … Google Scholar … Education … Awards and Service … Selected Publications …
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Viruses Reprogram Cells into Different Virocells
… reprogramming. The Science If it looks like a duck and quacks like a duck, so the adage goes, it must be a … from The Ohio State University and the University of Michigan studying how virus infections cause significant … surface microbes 10 to 1, and 20% to 40% of the microbes are infected at any given time. Microbial viruses can thus …
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Strain Engineering
The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no genetic tools enabling heterologous expression and functional exploration.  The developed strains represent …
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Synthetic Biology Lab
… lab is divided into a DNA synthesis production group and a synthetic biology applications group. The DNA … as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … into biotechnological or environmental applications.  We are interested in:  characterizing novel enzymatic …
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