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Uncovering the dominant role of root metabolism in shaping rhizosphere metabolome under drought in tropical rainforest plants
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Detailed analysis of the D-galactose catabolic pathways in Aspergillus niger reveals complexity at both metabolic and regulatory level
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Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
Gardeners and farmers around the country recognize that crop varieties … the crop for additional end products. The genetic diversity within this set of plants, each with a fully-sequenced … test what genes affect the plant’s adaptability to various environmental conditions. “To accelerate breeding for  …
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Emiley Eloe-Fadrosh
… 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging … thousands of metagenomic datasets from host-associated and environmental samples to identify and characterize genomic … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for … Automated Laboratories: Integrating Experimentation with Data.” The event will take place at the Seattle …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a … book featuring polar bears in winter scenes that came with crayons in various shades of white. To researchers … RNA sequences (metatranscriptomes) generated from diverse environmental samples around the world, resulting in a …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, … .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and stimulate a … As a leader in genomics for bioenergy and environmental solutions, the JGI is well-positioned to …
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A roadmap for research on crassulacean acid metabolism (CAM) to enhance sustainable food and bioenergy production in a hotter, drier world
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The genome of Syntrophorhabdus aromaticivorans strain UI provides new insights for syntrophic aromatic compound metabolism and electron flow
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Expanding standards in viromics: in silico evaluation of dsDNA viral genome identification, classification, and auxiliary metabolic gene curation
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