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JGI Pitches 2022 Visiting Faculty Program Collaborations
Laboratory (Berkeley Lab) hosted a pitch event promoting fully-supported summer research collaborations through the U.S. Department of Energy (DOE)’s Visiting Faculty Program (VFP) . The VFP is a summer professional … were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson for …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … being recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … The work was led by research scientist Stephen Nayfach, the study’s first author in the Microbiome Data Science group …
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SIPs with Standards
Stable Isotope Probing (SIP) is a powerful technique for studying microbial … more reusable, and more insightful, for the future of studying microbial communities.   …
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Frequently Asked Questions: Proposal Submission
… submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types supported, sample/capacity limits, …
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … bacterial polyphenol metabolism in an anoxic wetland soil. Nat Commun. 2021 Apr 29;12(1):1-6. … Couradeau E et al. Probing the active fraction of soil microbiomes using BONCAT-FACS. Nat Commun. 2019 …
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M … Alabama A&M University this fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna … is the area surrounding the roots of a plant in the soil. And I’m specifically working with a grass plant that’s …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
Register here Book your stay at the conference venue This inaugural event will bring together researchers across major ecosystems and disciplines who are developing and applying laboratory ecosystems …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. … sharing.  Recently, researchers have been able to study both sides of this interaction up close, using RNA …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. … sharing.  Recently, researchers have been able to study both sides of this interaction up close, using RNA …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … grass that adroitly handles droughts, floods and poor soils. This is the first paper that describes sorghum’s … a limiting factor – before or after flowering. For the study, the team grew two sorghum varieties: one that …
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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … will help solve energy and environmental challenges. Within days of the Deepwater Horizon oil rig explosion that …
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