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… beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell … sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … and experimental approaches with the aim of eventually studying virus-host dynamics in nature. In the last few …

… June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed to students … sharing concepts, tools and research results in genomics, metagenomics and the human microbiome. The workshop will … and seminars as well as practical hands-on sessions in bioinformatics and biostatistics. …

… Bob uses single-cell genomics and metagenomics to explore how microbes influence people and the environment. This includes studying the diversity, physiology and community ecology of …

… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field … waters and sediment with collaborators at the Center for Scientific Research and Higher Education at Ensenada … ecology. We also know little about where to collect the California Cone Snail  Californiconus californicus (and cone …

… Berkeley is responsible for receiving and processing user samples. His R&D work … to improve the JGI’s capabilities in the areas of metagenomics, single-particle genomics, and metabolic …

… within their rumen. There is another climate-minded reason for studying rumen: Livestock live off plant matter, and their … of rumen microorganisms . Thanks to the breadth of this study, researchers around the world are continuing to build …

… works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement … Communication Manager Sarah Sharman recently interviewed study first author Avinash Sreedasyam, a HudsonAlpha senior … studies. We also looked at the cross-species comparable study, where plants were subjected to three nitrogen sources …

… in regulating microbial cellulose production and biofilm formation, which affects a number of environments, including … researchers developed the first chemiluminescent biosensors for measuring cyclic di-GMP in bacteria through work enabled … metal corrosion in oil pipes. Scientists have tried to study cyclic di-GMP and cellular networks with fluorescent …

… Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the University of Oslo, Aaron … of Wisconsin, Maggie Sogin of the University of California, Merced, and Kevin Solomon of the University of … Along with the existing UEC members, their areas of study span the research interests of the JGI’s user …

… a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would …