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Jeremy Schmutz
… of five Gossypium allopolyploid species and their impact on cotton improvement. Nature Genetics 52: 525-533. …
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The Mobilome in the Mire
… light, and opening up new options for engineering these microbes in the future. Join Sarah Bagby (Case Western …
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Katherine Louie
… BP, Sundaresan V, Northen TR, et al. Bioactive diterpenoids impact the composition of the root-associated microbiome in …
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2024 Progress Report
… presented and attended meetings around the world to showcase the JGI’s science and what we enable for our users. … I can say that a key area for the JGI’s evolution is in how we manage our data and how we can make this more accessible to our users. We will …
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JGI@25: The Little Alga That Could
… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … of C. reinhardtii became available, data mined by the JGI shows that those sequences have been cited in almost … Merchant continues to work on the tiny alga with a mighty impact. Her lab has sequenced four additional green algal …
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The Expanding Universe of Methane Metabolisms in Archaea
… “Therefore, determining under which form it emerged and how it gave rise to the different pathways we see today is … geochemical data, which in turn can help to understand its impact on climate along earth history.” Marker genes for … Borrel and Gribaldo said. “Overall, these results show a striking case of how metabolic diversity can emerge …
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VEGA Symposium
… a “Viral Ecogenomics” community to foster discussion on how to best capture and characterize uncultivated viral …
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Taking Stock of the Known and Unknown Microbial Space
… into over 1.8 million bacterial and archaeal genomes to see how much of their diversity we've actually captured,” said … art of hands-on microbiology and experimental validation.  Microbes run the world, playing key roles in regulating … the known diversity of microbial genomes in the datasets, however, the team added that this information is still …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… in California’s Canal System,” focuses on anthropogenic impacts on wetland microbiome composition and metabolism, … work on which she is expanding with her study of microbes in California’s manmade water transport canals. …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… and already in its five years has made a really strong impact,” she said. “I look forward to seeing this internship … Clarissa Nobile, investigating interactions between microbes and venomous hosts. She also facilitates the …
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A More Intuitive Phytozome Interface
… at  https://phytozome-next.jgi.doe.gov/jbrowse/index.html How can I access the genome data that was formerly at … of the InterMine data warehouse, is still available in v13. However, the genomes included in PhytoMine will typically …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… To set up flexible, repeatable experiments on plants and microbes, Trent Northen’s group at Berkeley Lab created a …
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