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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science … applications in industry and biotechnology for the production of  clean energy . Summary Arbuscular mycorrhizal … The work conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … that will help solve energy and environmental challenges. In March 2008, the genome sequence of the forest fungus … Genome Inside: THE Bioenergy Tree …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample … with the students.  The project provided the students the freedom to define the specifics. It took the coming together … significant metabolic pathways related to methane production, nitrogen fixation, and dissimilatory sulfite …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on … into genes critical for roles including plant growth and cell wall development.  M. polymorpha is also among one of …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , … in turn affecting environmental and human health, energy production and agriculture. Understanding the compositions … awards DEB1840243, EAR1836768 and DEB1457794. Funding support also was provided from Colorado State …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … working on identifying switchgrass genes related to biomass production, drought tolerance, and other traits that make it …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. … In addition, Dr. Cole is focusing on how individual plant cells respond to their biotic environment using emerging … of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) …
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Triggering Morel Fruiting
… Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut … decomposition mechanisms of morel with multi-omic approaches, our results revealed a striking capability of morel mycelium to acquire carbon from lignocellulosic-abundant matters such as plant litter and to …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local … Billion Ton Report , identified potential switchgrass production areas across the U.S., guiding the location of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … waged. In the JGI@25 video below, Susan Lucas, former JGI Production Department Head and current ESnet Deputy Director …
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An Addiction Crucial to a Fungus’ Reproduction
… bacteria to regulate key components of its reproductive machinery The Science To better understand how beneficial … living within a host (endosymbionts) have on fungal host reproduction, and the reproductive genes they regulate. The … found that endobacteria establishing control over reproduction was a likely key to this evolutionary transition. …
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The Soil Blooms Green
… fields: a microbial community that might be quietly improving the soil. Penn State researchers Mary Ann Bruns and Terry Bell are digging in to understand how. …
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