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Natural soil microbiome variation affects spring foliar phenology with consequences for plant productivity and climate‐driven range shifts
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley … the Research Center One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and … are excited to continue our fruitful collaboration in the microbiome space that has resulted in many impactful papers …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth … what might happen for a stressed typical plant, one that does what’s called C3 metabolism, named for a 3-carbon compound that plays an essential role. But other plants, which do CAM, can kind of clam up …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The … chromosomes in the plant and illuminates the significant role sex plays in how the moss grows, stores carbon and … decompose in peatlands, and so carbon within their tissues doesn’t return to the atmosphere. Peat bogs also serve the …
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Dispatches From JGI Interns
Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and graduate students to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns … deep dives into genomics, computational tools, and big data.  …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of … for the internship program, but it also helped her in her role at the Lab as well.  One of the 2015 program alumnus …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers … (BGCs). BGCs make diverse molecules of value to both human and ecosystem health. But bacteria often fail to … have also harnessed CRAGE to create a plant-fertilizing microbiome. In work  reported in  Applied and Environmental …
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Benjamin Cole
Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse … of years ago, methane-producing archaea likely played a key role in determining the composition of the Earth’s … database maintained by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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JGI Welcomes New UEC Members
… (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect …
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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