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… time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. … Photobiont and fungus (mycobiont) live intertwined, with the photobiont transferring part of its … Genomics . To explore the genomes, Armaleo and colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead …

… Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the … JGI researcher, Zhong Wang, have adjunct faculty positions with the SNS, and Wang’s group was hosting another QSB … to solve research problems. In Visel’s group, Olmstead worked with postdoctoral fellow Ben Cole on a project …

… from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the production sequencing labs in … (up to 120 sequencing machines at maximum) maintained by a workforce that numbered more than 100 at its peak, all the … years ago. For JGIers, the moving process began in 2017 with annual one-day cleanups. During those days, they were …

… difficult to sequence and assemble, in turn limiting the use of modern, genomic breeding in these crops. For diploid … species, sequencing programs generally focus on a genotype with two identical sets of chromosomes to produce a … Research Centre for International Development (CIRAD), who worked on sequencing and assembling fragments of sugarcane …

… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of … depth required). Methylation detection currently only works using subread data, PacBio is working on support to … in the physical sciences in the United States, and is working to address some of the most pressing challenges of …

… Miscanthus  sequence offers insights into benefits of polyploidy and … by an international, multi-institutional team. The work was a joint effort led by scientists at the Center for … Department of Energy (DOE) Bioenergy Research Center, along with researchers from the Energy Biosciences Institute, the …

… Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it … outcomes of these infections can affect the interactions within their ecosystems. Summary Microbes drive the energy … predictive ecosystems models. Next, the researchers are working towards better understanding how nutrient …

… to living on a changing planet. In this short audio production, we’ll hear from Ed Hall, an ecologist at … the world’s rivers and their microbial communities. He’s focusing on the Arkansas River and how microbes might be influencing its health.  He sat down with me to talk about his project, and riffed a bit on what …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have been accepted … poorly-studied algal and viral genomes, and integrate with key DOE Office of Biological and Environmental Research … “with unprecedented precision” the gene functional networks and regulatory networks of a single strain of  …

… student Ti’Yanna Watson and graduate student LaMonika Dent worked with JGI mentors Yi Zhai and John Vogel on researching the … fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna Watson: My mentor is Dr. Yi …

… in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic … of vertebrate genomes, which led to the discovery of thousands of genetic switches implicated in developmental and … more about our seven science program — their areas of focus, major initiatives and more.  …

… snails, UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … patterns of Puerto Nuevo’s coastal waters and sediment with collaborators at the Center for Scientific Research and … internship for helping lay the foundation for her graduate work. “Being a JGI-UC Merced Intern during the summer of my …