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User Programs
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Cultivating Symbiotic Antarctic Microbes
Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple … in understanding the genomic basis and ecological consequences of microbe-microbe interactions. Using metagenomes …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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A Complex Confection Decoded: Sugarcane Reference Genome
Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in …
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JGI@25: The Little Alga That Could
… sustainable biofuel production. The JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and published in the journal Science . At the … when the JGI launched its effort to produce a full sequence of the Chlamydomonas genome in the early-2000s. She …
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Len Pennacchio
Program Defining the vast landscape of gene regulatory sequences in the human genome. Understanding how variation in regulatory sequences influences human disease/biology. Assessing and …
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Better Genome Editing for Bioenergy
Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. To … approach: CRISPR-Cas9 relies on RNA with a short guiding sequence (20 bp) that directs the endonuclease where to cut, … , the scientists thus set out to identify which sgRNA sequences were reliable. In an elegant, quantitative screen, …
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JGI Early Career Researchers Featured in mSystems Special Issue
… recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach … genomes directly from the environment and focuses on sequence reads to link mobile elements such as plasmids to …
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Examples: Successful LOIs & Submissions
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Exploring the loblolly pine (Pinus taeda L.) genome by BAC sequencing and Cot analysis
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Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes
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Erratum to: Complete genome sequence of Atopobium parvulum type strain (IPP 1246T)
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