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Integrating Experimentation with Data
… (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated Laboratories: Integrating Experimentation with Data.” The event …
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their biosynthetic logics to be understood, accessing these untapped metabolic …
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Scaling Up Existing Skill Sets
… in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … 4th year PhD student in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has your summer internship with the JGI had on your plans to pursue a STEM career?
 Doing the JGI internship has given …
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2022 Progress Report
… the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from … Science user facility at Lawrence Berkeley National Laboratory (Berkeley Lab), is to become the leading integrative genome science user …
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Ben Bowen
State University, Tempe, Chemical Engineering Post-doctoral positions – Arizona State University, Bioengineering & … niche partitioning among sympatric soil bacteria. Nature communications, 6(1), 8289. Yao, Y., Sun, T., Wang, T., …
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Trent Northen
… 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI … survey of Populus across genotypes and environments. 2024 Nature Sci Data. 11, 339. … McGivern BB et al. Decrypting bacterial polyphenol metabolism in an anoxic wetland soil. …
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Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions
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Synergistic interactions between anammox and dissimilatory nitrate reducing bacteria sustains reactor performance across variable nitrogen loading ratios
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H2-saturation of high affinity H2-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups
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An Automated Tool for Assessing Virus Data Quality
… have now developed CheckV (pronounced “Check-Vee”) to help researchers assess and improve the quality of … Environmental DNA sequencing can help scientist to recover the genomes of these viruses and associate them … of contamination from the host organism. As reported in Nature Biotechnology , a team from the U.S. Department of …
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Busting the Unbreakable Lignin
… components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: Cellulose, … California at Santa Barbara  recently published a paper in  Nature Microbiology offering irrefutable evidence that …
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Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and
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