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PMR5, an acetylation protein at the intersection of pectin biosynthesis and defense against fungal pathogens
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Expanding Virophage Diversity
… available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which … virophage marker gene MCP, they were able to identify 44,221 total virophage partial sequences, including over 28,000 … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer … sequence reads to link mobile elements such as plasmids to microbial host cells. In a separate article, research … Laboratory (Berkeley Lab). JGI is a DOE Office of Science user facility at Berkeley Lab.   … The U.S. Department of …
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Tracing the Evolution of Shiitake Mushrooms
… from around the world. By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … award 0000238431 to D.H., the GENOBIOREF (BIO2017-86559-R) project of the Spanish Ministry of Science and Innovation …
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A Grass Model to Help Improve Giant Miscanthus
… allows  Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such … was  recently published in  Nature Communications by an international, multi-institutional team. The work was a joint … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human … Cited Researchers list assembly by Clarivate Analytics. In 2020, she was named a Yellowhammer Woman of Impact.     Notable large-scale multi-institutional JGI projects and resulting publications that Grimwood …
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JGI announces 2024 Functional Genomics awardees
Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and … atmospheric carbon sequestration into sustainable biomaterials, and developing high-throughput methods to reveal … Below find a list of the nine researchers accepted for 2024. Proposals are accepted year-round; the next deadline …
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Triggering Morel Fruiting
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on just how morel fruiting is … source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … by the black morel, as well as the gene-expression programs encoding the biochemical processes unveiled by …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … genes the algae were expressing, the team sequenced their RNA transcripts. All sequencing was done through the JGI … point to this fundamental observation of cold and warm microbial networks, and just how clear and stark the …
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A Grass Model to Help Improve Giant Miscanthus
… allows Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such … was recently published in Nature Communications by an international, multi-institutional team. The work was a joint … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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High‐resolution phenotyping of sorghum genotypic and phenotypic responses to low nitrogen and synthetic microbial communities
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Silicon-rich soil amendments impact microbial community composition and the composition of arsM bearing microbes
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