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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… by capturing genomes of uncultivated giant viruses from environmental sequences across the globe, then using these … study from a JGI-led team uncovered giant viruses in the soil for the first time. The current study applied a … in samples from marine (55%) and freshwater (40%) environments. As a result, the giant virus protein space …
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Tracing the Evolution of Shiitake Mushrooms
… hemicellulose, and the toughest molecule, lignin. Understanding Lentinula genomes and their evolution could … same decay-related enzymes are useful in a wide range of environments.  Collecting and analyzing these samples was a …
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Fungal Friends or Foes in Plant Roots
… National Research Institute for Agriculture, Food and Environment (INRAE) and the U.S. Department of Energy (DOE) … the Genomic Science Program, the Office of Biological and Environmental Research in the US DOE Office of Science (to …
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JGI announces 2024 Functional Genomics awardees
… the JGI’s DNA synthesis and omics capabilities to enhance understanding of gene and genome function. Tapping into …
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DAP-seq Drives Robust Mapping of Gene Regulation
… an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering … and Beyond DAP-seq provides a comparative atlas for understanding plant evolution and adaptation. More … these ancient networks are recruited to help plants survive environmental stress.  Unlocking the Future of …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… for the Loxahatchee Refuge,  was published in the journal  Environmental Microbiome . “Before JGI was involved, I was … armed with the proper permits, to the refuge to collect soil samples from multiple locations. Back in the classroom, … of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Undergraduate Interns Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran … Tomas Tyml and Frederik Schulz, Eukaryotes in Extreme Environments Theo Loreaux and mentors Simon Roux and … the GOLD team and my mentors are very helpful and very understanding, and I never felt that asking dumb questions …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Matt Blow
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… and integrate with key DOE Office of Biological and Environmental Research (BER) initiatives in bioenergy crop … Their presence reduces the need to add fertilizers to the soil. diCenzo’s proposal is also notable as he had an … of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides …
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Mindfully Moving JGI
… to be able to divert it appropriately for the sake of our environment,” said Christine Naca, JGI’s SWELL Lead and part … of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides …
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JGI Announces 2025 New Investigator Portfolio
… harness JGI capabilities such as metatranscriptomics and environmental DNA sequencing to explore microbial and plant interactions across unique ecosystems, from alpine soils to tropical glaciers.  Proposals are accepted …
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